Friday, December 11, 2009

Part 2: Microevolution and Macroevolution

Introduction
Part 1

To continue our study of Evolution with Dr. Jay Wile and Marilyn Durnell...

Word count: 1,709
Estimated reading time: 7-12 minutes

As we learned in Module #1, once a hypothesis is formed, it is tested against experimental data. If the data continue to support the hypothesis, it eventually becomes a theory. If it does not, it must be altered or discarded. This is the next step in the scientific method, and it is where Darwin's hypothesis ran into some trouble.

After leaving the HMS Beagle, Darwin began experimenting with pigeons. He raised and bred them, trying to see if natural selection could result in new species of pigeon. To investigate further, he talked to other animal breeders. He interviewed those who bred dogs, horses, and pigeons, looking to their experience as a guide to whether or not his hypothesis could be correct. Indeed, he found much evidence that confirmed at least part of his hypothesis. He noted several cases of breeders who, over several generations, succeeded in producing pigeons that were so different from the species with which the breeder started that they could reasonably be classified as a new species of pigeon. The same seemed to be the case with dogs and horses as well.

As another piece of evidence for his hypothesis, Darwin compared the domesticated versions of many animals with their wild counterparts. Wild dogs, for example, looked and behaved quite differently from domesticated dogs. In fact, many breeds of domesticated dog cannot reproduce with wild dogs. Thus, by the definition of species as laid out in Module #1, these domestic dogs would be considered a wholly different species from any species of wild dog. Despite these incredible differences, domestic dogs were, many generations ago, simply wild dogs that men began to train and domesticate. Over generations, however, dog breeders would selectively mate those dogs that had what the breeder considered the best traits for domestication. Thus, the “wilder” dogs were not allowed to reproduce, and the tamer dogs were. This “manmade” selection, Darwin realized, mimicked natural selection, allowing the small variations that occurred during reproduction to “pile up,” leading to a new species of dog: the domesticated dog.

With these observations, Darwin was able to do two things. First, he established as a valid scientific theory the idea that the natural variations which occur during reproduction could, when guided by natural (or manmade) selection, take one species and pile up so many changes that the result could be something reasonably classified as another species. In other words, he showed that his explanation for the many species of finches in the Galapagos archipelago was scientifically viable. Second, Darwin was able to destroy forever an idea that had been established for generations before him: the immutability of species.

The immutability of species – The idea that each individual species on the planet was specially created by God and could never fundamentally change

In other words, scientists of Darwin's day believed that every creature was created during the time of creation and has existed, essentially the same, ever since that time. In the case of dogs, for example, those who held to the idea of the immutability of the species would say that in the Garden of Eden, there were Doberman pinschers, Saint Bernards, dachshunds, and chihuahuas. Each of these breeds of dog continued, essentially unchanged, up to the present. Darwin masterfully showed that this just wasn't true. He showed that all of these breeds of dog came from some original dog ancestor, and the natural variations that occurred in reproduction, guided by natural (or manmade) selection, resulted in the many different breeds of dog that exist to this day.

Although it sounds like Darwin had remarkable success in testing his hypothesis, you need to realize that what Darwin showed to be true was only a small part of his hypothesis of evolution. The idea that one ancestral finch could, over generations, give rise to many different species of finch was revolutionary, but it was not where Darwin's idea stopped. Once he had destroyed the idea of the immutability of the species, he wanted to go much further. He wanted to show that this same process, over millions (or perhaps billions) of years, could, eventually, cause the ancestral finch to give rise to an eagle. This is where Darwin ran into all sorts of trouble when comparing his hypothesis to the data.

Although it was rather easy to show that a species of wild dog could, over time, give rise to several breeds of domestic dog, it was quite another to show that a dog could give rise to a radically different species, such as a horse or a cow! In fact, Darwin found some evidence for this idea, but it was inconclusive at best. We will be looking at this data in depth in the next section, but for right now it is enough to say that there was so much data contradicting this part of his hypothesis, that he spent the majority of his book discussing the problems with his hypothesis.

In the end, Darwin found ample evidence that starting with a basic life form (a finch, for example), many other specialized species of this life form (many species of finch) can arise as a result of variation guided by natural (or manmade) selection. However, when it came to showing that a basic life form (once again, a finch) could evolve into a completely different life form (like an eagle) by natural selection, there was precious little evidence for his hypothesis and plenty of evidence against it. This has led scientists to divide Darwin's theory of evolution into two parts: the theory of microevolution and the hypothesis of macroevolution.

Microevolution – The theory that natural selection can, over time, take an organism and transform it into a more specialized species of that organism

Macroevolution – The hypothesis that processes similar to those at work in microevolution can, over eons of time, transform an organism into a completely different kind of organism

The distinction between macroevolution and microevolution cannot be overemphasized. There is so much evidence to support the idea of microevolution that it is a well-documented scientific theory. There is so little evidence for macroevolution and so much evidence against it that it is, at best, an unconfirmed hypothesis.

Well, if Darwin could not find much evidence in support of macroevolution and found a lot of evidence against it, how did it become so popular among scientists? There are several answers to that question, but one of the most important ones is that at the time, scientists were rather ignorant about a great many things which we take for granted. As a result, Darwin could argue his point rather convincingly.

Darwin basically said that since microevolution is so clearly apparent from a scientific point of view, then macroevolution should also be rather obvious. After all, if finches can change a little over a small amount of time, shouldn't they be able to change a lot over a long period of time? Assuming that the amount of change a given species can experience is essentially limitless, it will just take a little longer for microevolution to slowly lead to macroevolution.

To scientists of Darwin's day, this sounded like a reasonable argument. You see, they didn't know what we know about genetics. They didn't know that the genetic code is responsible for determining the range of characteristics that a species has. Thus, they didn't know that the natural variation we see in reproduction today is simply the result of different alleles being expressed in different individuals. Since we know that the number of alleles in the genetic code of any species is limited, we also know that the natural variation which occurs as a part of reproduction is limited as well. Thus, unlike Darwin argued, the variation that a species can experience is not unlimited. It is limited by the number and type of alleles in the species' genetic code. Thus, today we know that macroevolution cannot occur the same way that microevolution occurs.

You see, microevolution is simple to explain. When God created the animals and plants, he built into their genetic code a great amount of variability. As these plants and animals began reproducing, this variability began manifesting itself. This built-in variation was then acted upon by natural selection to create the variations that we see within a particular kind of creature. Thus, God probably created a “typical” dog during the creation week, and then the process of microevolution produced the many variations of dog that we see today. Microevolution, then, is a testament to God's foresight. As the Creator, God knew that the creatures of His world would have to adapt in order to survive. Thus, He built in their genetic codes the ability to change, and microevolution is simply the theory that describes how that change takes place and is directed by the pressures of the environment.

Macroevolution, however, is something quite different. The hypothesis of macroevolution assumes that a given life form has an unlimited ability to change. This means that some process must exist to add information to the creature's genetic code. After all, a creature's ability to change is limited by the information in the genetic code. There are only a certain number of genes and alleles of those genes. There is therefore only a certain number of possible variations in genotype and therefore a limited number of possible phenotypes. Thus, in order to get an unlimited amount of change, a creature must somehow find a way to add genes and alleles to its genetic code! This is something altogether different from microevolution and, as we will see in the next few sections, there is precious little data supporting such a hypothesis and quite a lot of data contradicting it.

In the end, then, we can distinguish between microevolution and macroevolution by referring to genetics. If we are talking about a species varying within its genetic code, we are talking about microevolution. This is how wild dogs became domestic dogs and how the many varieties of finch formed in the Galapagos archipelago. On the other hand, if we are talking about a species suddenly adding information to its genetic code, we are talking about macroevolution. The distinction is quite important, because the former is a well-established scientific theory while the latter is an unconfirmed hypothesis.

Look for Part 3, "Inconclusive Evidence: the Geological Column", tomorrow.

16 comments:

  1. Yes! This is good, but he forgot to mention one thing. Macroevolution assumes that over time, chaos will become order, this goes against the Second Law of Thermodynamics (which IS an established law, not a theory), which states that order becomes disorder, not the other way around.

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  2. Tecnically, it does not, and evolution is an established law, not a theory. The odds of evolution not happening are so small there is no analogy to relate it to. However, this whole thing is getting a bit boring. Readin stuides and reports that so far look biased in nature and not well researched along with everyone repeating the same opinions over again.

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  3. Einar: Ooh, good one :) Very true.

    Alex: Regardless of what the Theory of Evolution is called, it is BULL CRAP. Okay? I'm trying to show you! I don't believe in telling, I believe in showing. Unfortunately, the showing will only work if you have your eyes (and mind)open.

    You accuse us of being closed-minded all the time and yet when we are putting evidence against Evolution under your nose, all you can say is, "I don't believe that because there is too much evidence for Evolution." Okay, that would be fine. If there were.

    You refuse to look at the evidence against Evolution with an OPEN MIND.

    I understand about this getting boring, but I am going to get to some more detailed studies and evidence that I haven't mentioned much before. If you are honestly seeking the truth and will look at thing scientifically and not with this huge bias and chip on your shoulder, you might find the next few posts interesting after all.

    ~Kendra

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  4. Yes, and you are so open minded that you refer to the theory of evolution, which is accepted scientific law, as bull crap. I could really learn a lesson from you.

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  5. I've based my views on sounds science, not what all the most popular scientists are saying. At least hear me out before you close your mind again, won't you?

    ~Kendra

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  6. There is no science that refers to any theory as "bullcrap", unless you are discussing the theory of creation, which I have actually heard many scientists call bullcrap. Also, I do have an open mind. I go to creation museums, I read your articles, and I look at all the studies about creature that were later proven false. Maybe you could try opening yours? It's been such a long time that your mind could use a breath of fresh air.

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  7. Sorry to have been so quiet (admit it Alex, you missed me!), I have been out of town on business.

    Kendra, I am going to have to warn you about the rules for this set of posts...when Einar's responses are calmer than yours...we have a problem! :)

    Alex, all science is bias if you take into account that scientists all start with a hypothosis of some sort. We all have to approach an idea from somewhere. Has Kendra posting something inaccurate or untrue?

    Oh, and Evolution is a theory, not a law.

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  8. Bard: *sigh* I know, I'm sorry!!! You're right. Ugh, why-oh-why can't I stick to my own rules? :) Sorry, won't happen again.

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  9. We will let it slide THIS TIME, but only because evolution really is...well...you know what.

    Likewise Alex, according to the same rules, should be backing up his assertions with something other than his opinion.

    Thermodynamics was not established as a law concerning biology (although there is a sort of "Biological thermodynamics" in the field of bioenergetics, but it is not a law). The 2nd law of thermodynamics is about states of entropy in closed systems. Since it was never intended to be applied to living systems it must be done so in a flexible, analogous way, therein lies the rub.

    Is life a closed system? That would depend on who you talk to of course. Evolutionists would say no because of things such as food availability, weather, and geological events (earthquakes, erosion, volcanic eruptions, etc.). In reality there is no such thing as a closed system, so the evolutionist win this one on a technicality. The thing is that those who believe in creation really don't see it as closed either since God is the external creative force that made all life. So why are creationists the ones bringing up the law of thermodynamics? Because evolutionists like to have it both ways.

    When it comes to life, it is nearly closed. At least it should be from an evolutionary stand point. There is the influence of weather and geological events (earthquakes, erosion, volcanic eruptions, etc.), but mostly other life forms, which would make it closed. Once we have a closed system the law can work, and does. Natural selection is consistent with the 2nd law, but the evolutionary theories are not.

    The key to understanding the application of the law is understanding entropy. Now, I am not a physicist, so be kind if I murder this. Entropy, in physics, is related to energy, that is why the closed system element is so important. It is impossible for any device operating in a cycle to produce net work from a single heat reservoir; the production of net work requires flow of heat from a hotter to cooler reservoir. Yeah, I know, kinda cryptic. My understanding of this is much simpler, things will go from hotter to cooler naturally and it takes work (an outside influence) to change this. Something must be added, something does not come from nothing.

    In the case of biology, information (DNA) is substituted for energy. The state of information (energy) naturally goes from order (heat) to chaos (cold) unless some outside force introduces new information (work) . Natural selection may have indeed caused the finches on the island to adapt to more available food sources, but as far as we know from all fossil records to current observations, none have mutated in to eagles. The ordered information of the finch DNA was directed by natural selection, but all of the information was already available in the finch DNA for these adaptations. To mutate a finch to an eagle requires new information not available in finch DNA. Something can't come from nothing. Energy, order, information never increase without outside influence.

    At least that is the way I understand it.

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  10. Yes, order comes from order. No matter how many studies you do, you can't get past that. At least not past 4 or 5 coin flips.

    I like this simple example of the logic that is ingrained in us. If you are walking through the woods, and you find a trail, its traits might lead you to wonder what made it. Say this trail runs for about 4 yards, winds around quite a bit, and ends rather as abruptly as it began. You might think that it wasn't a trail at all, just some coincidence in how the trees and vegetation grew. If the trail was narrow but fairly straight and kept going, you might guess that it was made by deer or other animals. If the trail was two feet wide and the branches on either side of it snapped off up to a height of seven feet, you might guess that it's a man-made trail. If the trail is four feet-wide and paved, well... you get the idea. We have this natural assumption that patterns have reasons. Order comes from order. If I walked through the woods and discovered a stick with the bark gone and covered with a cross-hatching of lines in a geometrical pattern, I wouldn't wonder about the progression of events involving a branch falling into a stream, being battered by rocks into this form, then being picked up by an eagle and dropped here. No, I would say to myself, "I wonder -who- made this."

    According to the order we see, we assume some higher source of order created the pattern. What was know of biology in Darwin's day is akin to that deer trail, while what we know today could be compared to a six-lane interstate. He made a logical enough hypothesis (natural selection) about what he saw. But let's not make the same hypothesis when we are confronted with the far greater true order of life.

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  11. I'd be interested in a list of creatures determined to have common ancestory. It would reduce the supposed necessary size of Noah's ark.

    Also I read an article concerning a type of sea slug that seems to be able to add to it's genetic code by integrating genetics of its diet. Would this be a problem for your anti-macroevolution theory?

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  12. Something here is wrong. Einar and Alex are equally wrong, concerning "laws of science.

    "Laws of science" aren't inequivocally true. They are simply theories that haven't been disproved, yet, and/or are used as a basis for other theories and tests. To talk about "laws of evolution" or "laws of thermodynamics" as unquestionably true, prevents many scientists from understanding what they observe properly.

    Many "laws of science" have in part [or even mostly] been disproved, but they work for other theories we have based on them. And we haven't been able to come up with a better theory as to why and how these particular events occur under these particular circumstances.

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  13. It's true, considering the effects of micro-evolution over time would reduce the number of animals on the ark. "There were no poodles on the ark" as it has been aptly stated elsewhere.

    The difference between the theory of evolution and the laws of thermodynamics is that so far, the laws haven't been disproven yet, and they've not only been tested over a longer period of time, but also in all aspects of the natural world as we see it on earth. (It has been theorized that even the laws of gravity and thermodynamics break down inside a black hole.) When something has always been shown true, it's safe enough to assume it will continue to be true until shown otherwise.

    The theory of evolution, on the other hand, has not been shown to be true. The standards needed to prove it true are also under debate. For example, can you define species? I can offer you at least three different definitions used by scientists. If scientists can't agree on a definition of "species," then proving the theory of evolution will be like shooting at a moving target. No... more like playing with a five-year old who changes the rules to suit him so that he always wins.

    Contracting HIV means that you get a piece of the viral DNA inserted into your own cells' DNA. Does this mean that all HIV positive people are mutants?

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  14. Yes. I agree with the five-year old analogy.

    I try to come-up with at least one relavent, logical argument against the position of any article I read or write. Because if I can't, I'm probably not being honest with myself.

    Choosing perhaps to believe it, because I want to believe, not because it's true. No article can address all possible view points, so I should always be able to get at least one that wasn't addressed. Then I debate it with myself and others until I reach a solution.

    Viral DNA? I thought [and I may be very wrong] that viruses were not DNA but RNA that is one of the reasons they are sometimes not considered living.

    It was also part of my "Sea Slug" argument: The sea slug that I read about can "horizantally" gain the gene to produce chloryphyl. And then "make like a tree" and photosynthesize.

    The article states:

    The hypothesis of macroevolution assumes that a given life form has an unlimited ability to change. This means that some process must exist to add information to the creature's genetic code. After all, a creature's ability to change is limited by the information in the genetic code. There are only a certain number of genes and alleles of those genes. There is therefore only a certain number of possible variations in genotype and therefore a limited number of possible phenotypes. Thus, in order to get an unlimited amount of change, a creature must somehow find a way to add genes and alleles to its genetic code!

    This sea slug can add at least one specific genetic property to it's genetic code. And pass it on to its offspring. Supposing that we are at the end of all possible evolution [All or many creatures were able to add genetic code, but now almost none can.], and supposing that life developed first as single strands of RNA [with many more genetic properties than we are aware of,] and then evolved into various DNA is a possible evolutionary model.

    Also according to this particular model there would be no need for many evolutionary links, the genes change quite quickly as we have observed in microevolution, why would we assume the same is not true for macroevolution one change in DNA could permanently change an entire set of features of a creature in one generation. Granted, this same mutation would always have to occur in multiple offspring at nearly the exact same time.

    Which always leads back to the statistical probability...

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  15. Ok. Good question about viruses. That example came to my mind because I took a microbiology class last semester. There are actually seven types of viruses, classified by whether they have DNA or RNA in the mature capsules and whether this genetic material is single or double stranded. One kind contains a strand of RNA and does something called retrosynthesis. In retrosynthesis, the RNA is used as a template to make a strand of DNA. This requires the use of special proteins which these viruses possess. In the case of HIV, the strand of DNA produced is inserted right into the human DNA, from which it is copied by the body's protein machinery. However, it is not passed on because HIV resides in immune cells, not the gonads. All this is said in much more exaustive detail here. http://en.wikipedia.org/wiki/HIV#Entry_to_the_cell

    Micro-organisms have wide wide ranges of evolutionary possibility because of their relative simplicity and rapid reproduction rate, and this is probably the most exciting and terrifying phenomena we study today in modern medicine. Recombining genes in bacteria, using retroviruses and phages and the like, has let us harness bacteria to produce human proteins like insulin on a large scale.

    But as exciting as all this is, it doesn't mean that all the macro-evolution in the world could happen like this. Random gene switching like this benefits few things more complex than bacteria (and it kills the vast majority of those anyway) and no things (that I know of) more complex than your sea slug. Past that, random gene switching causes disease. Humans may harness the process for our own uses and may even be able to improve physical humanity over time, but this would be a guided process, similar to the use of fire in a furnace as opposed to the distructive nature of a wildfire.

    I also strongly believe gene shuffling is restricted to life-forms which already exist. Look, the chemical processes which take place in all living cells are chemical reactions which simply do not happen under normal conditions. How then do they happen? Not by miracle, but by enzymes. Cars are put together all the time in our factories, but never in a junk yard, though all the parts for a functional car may be found there. Chance can not explain the existance of enzymes. It takes machinery to make the machinery which makes the machinery and so on. Your brain cells are brain cells because of the proteins they have which allow it to do certain processes and not others. Ditto for every other type of cell you have. Biological processes do not happen without proteins, including the making of proteins themselves. I don't know how much I can stress this. Scientist measure how much energy it takes for chemical reactions to happen and for a molecule to remain stable. Our finest labs and decades of experience still struggle, sometimes fruitlessly, to produce by relatively ordinary means the chemicals which life forms produce with ease every second by the use of their enzymes. That gene manipulation we have done with micro-organisms is dependant on the use of enzymes.

    Life as we know it could not have come about by chance. It is not possible by the laws of thermodynamics. I'm talking about the energy of atoms which allows them to bond, which is a matter of simple and objective experimentation. The processes of life did not come from nature.

    Ok, I'm going to stop ranting, but at least leave the proof that my ranting is justified. Here is the entire article on enzymes. I strongly encourage you to read the entire thing, but especially take note of how quickly enzymes make reactions happen and how long it would take without them. The section on involvement in diseases is also very telling. http://en.wikipedia.org/wiki/Enzyme

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  16. Lissy:

    Thank you, for expending so much energy in the rebuttal. It makes me think, perhaps, it was not as very illogical an argument, as it appeared to me when I wrote it.

    The references were quite interesting.

    The very existance of specific enzymes is hard to explain for the evolutionists, eh?

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